Tonight I continued watching the PAG Industry Workshop offered by Oxford Nanopore Technologies. Sean Prosser from the University of Guelph presented “From pandemic preparedness to planetary biodiversity: ONT enables targeted amplicon sequencing at massive scale.” Prosser noted that there are almost 35,000 amplicon-based genetic tests available in the US per year. Prosser also noted that […]
The Org. One program is fascinating. I would love to be involved. Tonight, I watched the London Calling 2024 session titled “Org.one to 10.” Kara Dicks, Program Manager at Conservation Genomics with Org.one, spoke about the biodiversity crisis. The Org.one program supports local sequencing. The program has supported over ninety projects. Participants receive kits and […]
I started watching videos from the Nanopore Learning Lesson Library. The Knowledge Exchange video “Getting the most out of a flow cell” caught my attention. Connie O’Donnell was the host and was joined by Anne-Marie Wadsworth who discussed tips to maximize flow cell use. Wadsworth explained that all flow cells have a maximum run time […]
Jaime A. Chaves from San Francisco State University and the Universidad San Francisco de Quito in Ecuador spoke at London Calling 2023 on “Galapagos Genetic Barcode: a model for island economic resilience during the COVID-19 pandemic.” Chaves explained how their interests in science and community merged with this project. Galapagos is a top tourist destination […]
Adriel Latorre-Perez from Darwin Bioprospecting Excellence S.L. in Spain presented at the Nanopore Community Meeting 2021 about “A round trip to the desert: in situ nanopore sequencing informs targeted bioprospecting.” They defined microbial bioprospecting as “the search for biotechnologically-relevant products from microbial communities.” The products could be enzymes, molecules, or microbiomes. The process starts with […]
Tonight I watched a five-minute Oxford Nanopore Technologies London Calling 2022 session by Mrinalini Erkenswick Watsa and titled “Genomics in the jungle: a field laboratory success story.” Mrinalini Erkenswick Watsa is at the San Diego Zoo Wildlife Alliance and is a field scientist working on conservation. They spoke about the need to assess populations pre […]
Nicola Hall from the University of Oxford in the UK spoke at London Calling 2022 about “Multiplexed, long-read CaptureSeq identifies full-length transcript isoforms in the human brain.” I have been interested in CaptureSeq and this ten-minute session was intriguing. Hall and colleagues are interested in voltage-gated channels, but they have very low levels of RNA […]
Kame A. Galan-Huerta from the Autonomous University of Nuevo Leon in Mexico presented at the Nanopore Community Meeting 2022 a ten minute session entitled “Identification of resistance mutations to direct-acting antiviral agents against HCV in infected subjects in Mexico.” They spoke about adapting protocols to detect the RNA positive sense hepatitis C virus. Glan-Huerta explained […]