Javeria Aijaz from the Indus Hospital and Health Network in Pakistan presented at London Calling 2025 on “Pediatric leukemias: clinical validation of Oxford Nanopore-based gene expression profiling.” Aijaz explained that pediatric leukemias are divided into three lineages. Classification often requires flow cytometry. WHO introduced the category of “Not Further Classified” (NFC). Currently, comprehensive diagnosis requires […]
Tonight we started our first P2 run with two PromethION flow cells. I also continued watching the London Calling 2023 Showcase Stage on liquid biopsy. I watched them out of order! Today I watched Billy Lau from Stanford University School of Medicine do a quick presentation titled “Nanopore sequencing of cell-free DNA for methylation-based breast […]
Tonight, I watched Harika Urel from the Helmholtz AI Institute and Technical University of Munich present a five-minute talk at London Calling 2023. The intriguing title of the recording is “Squiggle analysis for metagenomics viability inference.” Urel is a Ph.D. student in Dr. Lara Urban’s lab. I have watched several talks by Urban in the […]
Adaptive sampling and real-time in silico enrichment have come up frequently in the last couple of months. I still haven’t used this feature and want to learn more. Tonight I watched the London Calling 2022 session by Alex Sneddon from the Australian National University entitled “RISER: real-time in silico enrichment of RNA species from nanopore […]